Elixir workflow workshop Nov 2021

Introduction to Nextflow workflow system

This repository contains the Nextflow tutorial for Elixir workflow workshop taking place on November 2021.

Get started

The simplest way to try out this tutorial consists accessing this repository via Gitpod cloud environment.

To access the virtual training environment make sure to have a GitHub account account and a Gitpod, then clicking on the following link:

https://gitpod.io/#github.com/nextflow-io/elixir-workshop-21

Note

the setup of the environment may require a few minutes

Once complete follow the tutorial at the link below:

https://nextflow-io.github.io/elixir-workshop-21/docs/

Contents:

• About the course
• Introduction to Nextflow
• Launching a pipeline
• The Nextflow language
• The Nextflow subworkflows and modules
• The Nextflow config file

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